The Three Goddess' charms:
Go to the Inn and go where the three girls are. Go up to Farore and fuse kinstones with her. It should show the guy named "Gorman" going up to the locked house, saying he wants to rent it out. Go talk to him, and decide witch Goddess you want to give you a charm. Whatever one, go talk to her, and she goes to live in the house. Go talk to her in there, and she gives you a charm for your empty bottle.

Extra Goodies in The Legend of Zelda The Minish Cap:
Here is how to unlock some extra goodies.

Golden Tingle Statue - Complete all Kinfusions, then talk to Tingle.
Sound Test - After Getting all 130 Original Fingurines, talk to the guy sitting outside at the table.

Get The Light Arrows:
If you have already beaten the game you can not get the Light Arrows. First you need to go to Hyrule Town, and go to the North West part of town, and you will see a house with a yellow roof. Go into it and Fuse Kinstones with the man. It will unlock a teleport to the Castle in the Cloud Tops. In the castle you will find an Old man Plagued by an evil spirit, use the gust jar to suck it up. When you come back to the Cloud Tops later in the game, go to the old man to get the Light Arrows!

Get Remote Bombs:
To get the remote bombs, go back to Minish Village. Talk to the elder, then Kinfuse with him. Then, exit town via the northwest exit. Enter the house with the picori that gave you the bombs. He should give you the remote bombs. Lay a bomb down, then press that button again to detonate it whenever you'd like.
Note: Talking to the picori again while cause you to get the normal bombs again.

Carlov Medal:
Collect all 136 figurines

Open Locked Hyrule House:
Collect original 130 figurines

Magic Boomerang:
In order to get the Magic Boomerang, first fuse with the Tingle Siblings, which reside in South Hyrule Field, Lake Hylia, Royal Valley and Lon Lon Ranch. They will each open up a tree in North Hyrule Field. There, you may find various things and a switch. Hit all four switches to open up the middle ladder. Inside is the Magic Boomerang.

Swordsman newsletter in The Legend of Zelda The Minish Cap:
When you fuse kinstones with the postman running everywhere in Hyrule Town, a girl will go into the post office next to the stamping guy. You can buy the swordsman newsletter for a huge price. Each issue contains tips to get around the secret areas of hyrule.

Swordsman newsletter - Fuse kinstones with the postman in Hyrule Town.

Extended Great Spin Attack:
You need all 8 Tiger Scrolls and the flippers. When you fuse kinstone with the swordsman trainer in Mt. Crenel it will open a waterfall passage in Castor Wilds. And when you fuse kinstones with the trainer in Lake Hylia it will open another waterfall passage in North Hyrule field. In both passages talk to the swordsman trainers there.

Great Spin Attack Upgrade #1 - Fuse kinstones with Swordsman Trainer in Mt. Crenel.
Great Spin Attack Upgrade #2 - Fuse kinstones with Swordsman Trainer in Lake Hylia.

Bottle Locations:
These are the locations and ways to get the bottles.

1.Trilby Highlands. - Buy it from the Deku in the cave in Trilby Highlands.
2.Hyrule Town - Shrink and enter the shop from mamas cafe. Grow, take the bottle, and the guy will tell you to feed his dog. Go to lake hylia, and feed the dog in hous
3.Your house - Fuse kinsyones with master smith. Go to Eastern Hills, and get the bottle in the chest.
4.Eaastern Hills - Finish the Goron sidequest.

Quiver Upgrades:
There are a total of 3 quiver upgrades, and here are their locations:

Quiver 1 - Buy for 600 rupees at Stockwell's, after beating the Fortress of Winds.
Quiver 2 - In Royal Valley, answer the Great Dragonfly Fairy's questions correctly.
Quiver 3 - Kinfuse with a Minish near the beginning of Wind Ruins then find the quiver.

Bomb Bag Upgrades:
There are three Bomb Bag upgrades (two in the European version), and here are their locations:

Bomb Bag 1 - On Crenel Wall, bomb the cracked wall, then throw a bomb in the fountain. Answer "neither" to the fairy's question.
Bomb Bag 2 (Not in European Version) - After buying the boomerang, buy the bomb bag for 600 rupees at Stockwell's.
Bomb Bag 3 - Kinfuse with Belari in the Minish Woods, then find the Bomb Bag in Wind Ruins.

Wallet Upgrades in The Legend of Zelda The Minish Cap:
There are three wallet upgrades, and here are their locations:

Wallet 1 - Buy at Stockwell's for 80 rupees.
Wallet 2 - Kinfuse with Mayor Hagen then go and find the Wallet in Lon Lon Ranch.
Wallet 3 - After infusing your blade with two elements, jump up a ledge in Eastern Hills with the cane of Pacci to find a fairy that gives you the Wallet.

Special Sword Techniques in The Legend of Zelda The Minish Cap:
During certain points in the game, you will come across hidden Sword Dojos who will teach you a Special Sword Technique. But they will only teach you the Technique after you have a certain Item or have completed a certain task. Below, is the location of the Sword Dojo and the Requirement to learn the Technique:

The Spin Attack - Visit Swiftblade in Hyrule Town after completing the Deepwood Shrine
The Rock Breaker - Visit Swiftblade in Hyrule Town after you have received the White Sword
The Roll Attack - Visit Greyblade on Mount Crenel after fusing the Earth and Fire Elements with your Sword
The Dash Attack - Visit Swiftblade in Hyrule Town after getting the Pegasus Boots
The Peril Beam - Visit Waveblade in Lake Hylia after getting the Flippers
The Sword Beam - Visit Grimblade in Hyrule Castle after getting the Flame Lantern
The Down Thrust - Visit Swiftblade in Hyrule Town after getting Roc's Cape
The Great Spin Attack - Visit the Ghost of Swiftblade in Castor Wilds after collecting all of the Seven Tiger Scrolls

Get the Mirror Shield:
. This shield upgrade can deflect more types of projectiles than the regular shield, and it's a lot larger. To get it, you must have beaten the game and saved, and completed the Goron sidequest (the one that gets you the bottle). Fuse with the Goron all the way on the right in the cave where you got the bottle; this will make Biggoron appear on top of Veil Falls, near the whirlwind which takes you to the Cloud Tops. Make sure you have a shield with you, and go talk to him. He will ask if he can eat your shield. Let him. Don't buy another shield, but come back a while later, talk to him, and he will give you the Mirror Shield.

Unlimited Rupees:
First get mole mitts then go to the door of your house. On the left side of the door, dig to get 20 rupees. Go in your house and come back out to repeat the step. The 20 rupees will always be there.

Dark Nut Killing:
An easy way to kill a dark nut is to use the Dash Attack. If you use it, you will run right "through" him, and he will be confused for a while. Then, do it the other way to deal 2 hits on him!

Sound test:
To get the sound test , get all 136 figurines.Show the guy outside the cafe. He'll unlock Treasure Hut.(House with robot on top).

Get Fairies:
If you see a normal solitary tree, run into it and a fairy will come out.

Strange wall in links house:
To do this glitch you have to go to smiths room in links house. Then start tapping along the bottom wall with your sword until you here a bomb wall sound. After you hear it put a bomb down next to the wall that made the bomb wall sound letting it explode. Doing this will cause the wall stop making the strange sound walk out the room then walk back in the room to start up the glicth again.

Catch 2 fairies in one bottle:
First go to the tree with a door in it around South Hyrule Field with an empty bottle equipped to one of your buttons and enter the tree. Go down the stairs and you will be in a room with three fairies flying around the room. Stand in the center of the room and wait for two fairies to get within catching range and press the bottle button once and before the fairy capture text appears quickly press the button again. If done correctly, you should have caught two fairies in one bottle!!!!!

Book falls early:
When returning the library books and you go to the scholar's house, talk to him then leave. Go back in and talk to him. He will say a book had fallen, but you have not made it fall yet.